STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL35005.1Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. (326 aa)    
Predicted Functional Partners:
SEL35018.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
    0.970
SEL35052.1
Predicted protein.
 
    0.966
SEL35074.1
Hypothetical protein.
 
     0.895
SEL34989.1
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
 
     0.837
SEL35115.1
Hypothetical protein.
 
     0.833
SEL35167.1
Two-component system, OmpR family, sensor kinase.
 
     0.821
SEL34966.1
Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family.
       0.782
SEL35099.1
Predicted ferric reductase.
 
     0.754
SEL35149.1
Two-component system, OmpR family, response regulator.
 
     0.702
SEL04786.1
NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator.
 
  
 0.616
Your Current Organism:
Roseovarius nanhaiticus
NCBI taxonomy Id: 573024
Other names: CCTCC AB 208317, DSM 29590, LMG 24840, LMG:24840, MCCC 1A03543, R. nanhaiticus, Roseovarius nanhaiticus Wang et al. 2010, Roseovarius sp. NH52J, strain NH52J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.