Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADL50174.1 | ADL50848.1 | Clocel_0394 | Clocel_1089 | PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3606 GCN5-related N-acetyltransferase. | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ckr:CKR_2027 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.403 |
ADL50174.1 | cobT | Clocel_0394 | Clocel_2210 | PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3606 GCN5-related N-acetyltransferase. | Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | 0.604 |
ADL50848.1 | ADL50174.1 | Clocel_1089 | Clocel_0394 | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ckr:CKR_2027 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3606 GCN5-related N-acetyltransferase. | 0.403 |
cobT | ADL50174.1 | Clocel_2210 | Clocel_0394 | Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). | PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3606 GCN5-related N-acetyltransferase. | 0.604 |