Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADL51112.1 | ADL51113.1 | Clocel_1359 | Clocel_1360 | PFAM: metallophosphoesterase; KEGG: cpf:CPF_2416 Ser/Thr protein phosphatase family protein. | KEGG: cpf:CPF_2415 hypothetical protein. | 0.970 |
ADL51112.1 | ADL51114.1 | Clocel_1359 | Clocel_1361 | PFAM: metallophosphoesterase; KEGG: cpf:CPF_2416 Ser/Thr protein phosphatase family protein. | KEGG: pin:Ping_2639 P-loop ATPase. | 0.472 |
ADL51113.1 | ADL51112.1 | Clocel_1360 | Clocel_1359 | KEGG: cpf:CPF_2415 hypothetical protein. | PFAM: metallophosphoesterase; KEGG: cpf:CPF_2416 Ser/Thr protein phosphatase family protein. | 0.970 |
ADL51113.1 | ADL51114.1 | Clocel_1360 | Clocel_1361 | KEGG: cpf:CPF_2415 hypothetical protein. | KEGG: pin:Ping_2639 P-loop ATPase. | 0.437 |
ADL51114.1 | ADL51112.1 | Clocel_1361 | Clocel_1359 | KEGG: pin:Ping_2639 P-loop ATPase. | PFAM: metallophosphoesterase; KEGG: cpf:CPF_2416 Ser/Thr protein phosphatase family protein. | 0.472 |
ADL51114.1 | ADL51113.1 | Clocel_1361 | Clocel_1360 | KEGG: pin:Ping_2639 P-loop ATPase. | KEGG: cpf:CPF_2415 hypothetical protein. | 0.437 |
ADL51114.1 | ADL53485.1 | Clocel_1361 | Clocel_3815 | KEGG: pin:Ping_2639 P-loop ATPase. | KEGG: ctc:CTC00182 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.405 |
ADL51114.1 | sbcD | Clocel_1361 | Clocel_0620 | KEGG: pin:Ping_2639 P-loop ATPase. | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.410 |
ADL53485.1 | ADL51114.1 | Clocel_3815 | Clocel_1361 | KEGG: ctc:CTC00182 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | KEGG: pin:Ping_2639 P-loop ATPase. | 0.405 |
sbcD | ADL51114.1 | Clocel_0620 | Clocel_1361 | Nuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | KEGG: pin:Ping_2639 P-loop ATPase. | 0.410 |