STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL51514.1TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: ctc:CTC01257 Mg(2+) chelatase family protein; SMART: AAA ATPase. (505 aa)    
Predicted Functional Partners:
ADL51515.1
KEGG: cno:NT01CX_2152 DNA uptake protein; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein.
 
 
 0.943
ADL51513.1
PFAM: uncharacterized protein family UPF0102; KEGG: cac:CAC1763 hypothetical protein; Belongs to the UPF0102 family.
 
  
 0.913
ADL52727.1
PFAM: phosphoribosyltransferase; KEGG: ckr:CKR_3238 hypothetical protein.
 
  
 0.815
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
 
  
 0.683
ADL51154.1
KEGG: cby:CLM_3364 ComEC/Rec2 family protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
 
  
 0.676
ADL51287.1
PFAM: RNA binding S1 domain protein; KEGG: cbh:CLC_1202 30S ribosomal protein S1.
 
     0.523
ADL49885.1
KEGG: cbl:CLK_3228 amidohydrolase-like protein; Belongs to the peptidase M20A family.
  
   0.522
ADL51482.1
KEGG: cno:NT01CX_1926 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein.
   
   0.521
ADL51483.1
KEGG: cac:CAC2139 flagellar basal body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein.
   
   0.521
codY
GTP-sensing pleiotropic transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.
       0.501
Your Current Organism:
Clostridium cellulovorans
NCBI taxonomy Id: 573061
Other names: C. cellulovorans 743B, Clostridium cellulovorans 743B, Clostridium cellulovorans str. 743B, Clostridium cellulovorans strain 743B
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