STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bgaABeta-galactosidase; Involved in plant cell wall degradation in cooperation with cellulosome. Hydrolyzes both p-nitrophenyl-alpha-L-arabinopyranoside (pNPAp) and p-nitrophenyl-beta-D-galactopyranoside (pNPGp), with higher activity for pNPAp. Shows hydrolysis activity against p-nitrophenyl- beta-D-fucopyranoside (pNPFp), but not against p-nitrophenyl-alpha-L- arabinofuranoside (pNPAf), o-nitrophenyl-beta-D-galactopyranoside (oNPGp), p-nitrophenyl-beta-D-xylopyranoside (pNPXp), p-nitrophenyl- beta-D-glucopyranoside (pNPGLp), p-nitrophenyl-beta-D- cellobiopyranoside (pNPCp), p-nitrophenyl- [...] (659 aa)    
Predicted Functional Partners:
ADL49830.1
Beta-galactosidase; KEGG: gym:GYMC10_5609 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein.
  
  
 
0.920
ADL52219.1
Beta-galactosidase; KEGG: pmo:Pmob_0829 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein.
  
  
 
0.919
ADL53745.1
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: cbe:Cbei_1236 glycoside hydrolase family protein.
  
 0.914
ADL51007.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.907
ADL52300.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.907
ADL53749.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.907
ADL50333.1
Alpha-galactosidase; KEGG: gyc:GYMC61_0528 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D.
 
  
 0.768
ADL52497.1
KEGG: alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D.
 
  
 0.768
ADL52484.1
PFAM: glycoside hydrolase family 4; KEGG: pjd:Pjdr2_4668 glycoside hydrolase family 4.
 
  
 0.755
ADL52223.1
PFAM: glycoside hydrolase clan GH-D; KEGG: pjd:Pjdr2_0390 glycoside hydrolase clan GH-D.
 
  
 0.724
Your Current Organism:
Clostridium cellulovorans
NCBI taxonomy Id: 573061
Other names: C. cellulovorans 743B, Clostridium cellulovorans 743B, Clostridium cellulovorans str. 743B, Clostridium cellulovorans strain 743B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.