STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL53753.1PFAM: polysaccharide deacetylase; KEGG: cdl:CDR20291_2613 putative polysaccharide deacetylase. (227 aa)    
Predicted Functional Partners:
ADL50908.1
Glycoside hydrolase family 18; KEGG: cac:CAC1556 chitinase family protein; PFAM: glycoside hydrolase family 18; Fibronectin type III domain protein; SMART: chitinase II; Fibronectin type III domain protein.
 
    
 0.835
ADL53754.1
KEGG: bcy:Bcer98_1709 hypothetical protein.
 
     0.801
ADL50261.1
PFAM: polysaccharide deacetylase; KEGG: cpy:Cphy_0405 polysaccharide deacetylase.
  
     0.771
ADL50733.1
PFAM: glycosyl transferase family 2; KEGG: cac:CAC2408 glycosyltransferase.
  
  
 0.474
ADL51588.1
PFAM: glycosyl transferase family 2; KEGG: cbf:CLI_2599 glycosyl transferase, group 2 family protein.
  
  
 0.474
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
       0.458
ADL52011.1
Amino acid adenylation domain protein; KEGG: bbe:BBR47_27890 tyrocidine synthetase III; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.444
ADL53751.1
KEGG: gka:GK2149 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.430
Your Current Organism:
Clostridium cellulovorans
NCBI taxonomy Id: 573061
Other names: C. cellulovorans 743B, Clostridium cellulovorans 743B, Clostridium cellulovorans str. 743B, Clostridium cellulovorans strain 743B
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