Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV23911.1PFAM: Protein of unknown function DUF1621; KEGG: hypothetical protein. (149 aa)    
Predicted Functional Partners:
ACV23912.1
TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: dde:Dde_0062 GTP-binding protein EngA.
       0.789
ACV23913.1
TIGRFAM: methanogenesis marker protein 11; PFAM: domain of unknown function DUF1743; KEGG: pca:Pcar_2393 hypothetical protein.
       0.789
trpC
PFAM: Indole-3-glycerol phosphate synthase; KEGG: nis:NIS_0989 indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.673
ACV23914.1
PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: vha:VIBHAR_01513 hypothetical protein.
       0.663
ftsZ-2
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.635
ACV24423.1
TIGRFAM: methanogenesis marker protein 8; PFAM: conserved hypothetical protein.
  
    0.596
psmA
Proteasome endopeptidase complex, alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
    0.513
ACV24153.1
KEGG: zinc finger protein; K06874; TIGRFAM: ZPR1-like zinc finger protein; ZPR1-related zinc finger protein; PFAM: ZPR1-type Zinc finger domain protein; SMART: ZPR1-type Zinc finger domain protein.
       0.501
ACV25197.1
PFAM: PUA domain containing protein; SMART: PUA domain containing protein; KEGG: TMA20; Protein of unknown function that associates with ribosomes and has a putative RNA binding domain; interacts with Tma22p; null mutant exhibits translation defects; has homology to human oncogene MCT-1; K07575 PUA do-TRUNCATED-.
       0.501
ACV25184.1
PFAM: Ribosome maturation protein SBDS-like; KEGG: hypothetical protein, conserved.
       0.498
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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