Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV23916.1Chromosome partitioning ATPase-like protein; KEGG: tbd:Tbd_1928 flagellar biosynthesis switch protein. (256 aa)    
Predicted Functional Partners:
ACV23917.1
PFAM: helix-turn-helix HxlR type; KEGG: ppd:Ppro_1054 HxlR family transcriptional regulator.
 
     0.971
ACV24610.1
Hypothetical protein.
  
    0.844
ACV24609.1
KEGG: hypothetical protein.
  
    0.839
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.540
ACV23918.1
PFAM: Protein of unknown function UPF0113.
       0.496
ACV23920.1
Phytoene dehydrogenase and related protein-like protein; KEGG: hypothetical protein.
  
    0.435
ACV23919.1
KEGG: hypothetical protein.
       0.422
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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