Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV23932.1PFAM: type II secretion system protein E; KEGG: vha:VIBHAR_06193 flp pilus assembly ATPase CpaF. (517 aa)    
Predicted Functional Partners:
ACV23931.1
PFAM: Type II secretion system F domain.
 
  
 0.967
ACV25014.1
PFAM: Type II secretion system F domain.
 
  
 0.956
ACV25018.1
PFAM: flagellin.
  
  
 0.928
ACV23933.1
Hypothetical protein.
       0.921
ACV23934.1
Hypothetical protein.
       0.921
ACV23935.1
Hypothetical protein.
       0.921
ACV25017.1
PFAM: flagellin.
  
  
 0.887
ACV25016.1
Flagella biogenesis ATPase-like protein; KEGG: bba:Bd2712 DNA repair protein RadA.
 
  
 0.877
ACV25021.1
PFAM: Flagella accessory C family protein; KEGG: Viral A-type inclusion protein repeat containing protein.
  
  
 0.872
ACV23928.1
Hypothetical protein.
       0.857
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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