STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV23951.1PFAM: protein of unknown function DUF77; KEGG: sfu:Sfum_0022 protein of unknown function DUF77. (97 aa)    
Predicted Functional Partners:
ACV23952.1
PFAM: Carbamoyltransferase; KEGG: pub:SAR11_0554 carbamoyltransferase.
       0.882
ACV25249.1
PFAM: phosphoesterase PA-phosphatase related; SNARE associated Golgi protein; SMART: phosphoesterase PA-phosphatase related; KEGG: dps:DP0274 hypothetical protein.
 
     0.645
ACV24984.1
PFAM: AMMECR1 domain protein; KEGG: ppd:Ppro_3512 AMMECR1 domain-containing protein.
  
    0.629
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family.
       0.609
ACV24970.1
PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; KEGG: dma:DMR_37530 putative endonuclease IV.
       0.605
ACV25063.1
PFAM: Protein of unknown function DUF373.
       0.592
ACV23950.1
Transcriptional regulator protein-like protein; KEGG: hypothetical protein.
       0.584
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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