Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV23960.1TIGRFAM: auxin efflux carrier; PFAM: Auxin Efflux Carrier; KEGG: cha:CHAB381_0033 auxin efflux carrier (AEC) family protein. (302 aa)    
Predicted Functional Partners:
coaD
Cytidyltransferase-related domain protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family.
  
  
 0.990
htpX
PFAM: peptidase M48 Ste24p; KEGG: dvm:DvMF_0946 peptidase M48 Ste24p; Belongs to the peptidase M48B family.
  
  
 0.874
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
       0.781
ACV23963.1
KEGG: pmu:PM2006 hypothetical protein.
       0.715
ACV23964.1
Hypothetical protein.
       0.644
ACV25063.1
PFAM: Protein of unknown function DUF373.
       0.637
ACV24348.1
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: dol:Dole_1836 polysaccharide biosynthesis protein.
 
  
 0.569
ACV23965.1
Hypothetical protein; KEGG: pcr:Pcryo_0352 UDP-N-acetylglucosamine-peptide-N- acetylglucosaminyltransferase.
       0.510
ACV23957.1
PFAM: class II aldolase/adducin family protein; KEGG: hsm:HSM_1905 putative aldolase.
       0.509
ACV23959.1
Peptidase S16, Lon-like protease; KEGG: son:SO_3391 ATP-dependent protease, putative; TIGRFAM: peptidase S16, Lon-like protease; PFAM: peptidase S16 lon domain protein; SMART: AAA ATPase; Belongs to the peptidase S16 family.
       0.495
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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