Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ACV23971.1PFAM: conserved hypothetical protein; KEGG: nam:NAMH_0411 hypothetical protein; Belongs to the UPF0128 family. (233 aa)    
Predicted Functional Partners:
ACV23970.1
Hypothetical protein.
       0.627
ACV23972.1
PFAM: GTP-binding protein HSR1-related; KEGG: similar to CG3983-PB, isoform B.
       0.511
ACV24298.1
PFAM: Protein of unknown function DUF371.
       0.501
ACV23973.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: nam:NAMH_0632 hydrogenase-4 component I.
       0.407
ACV23974.1
Formate hydrogenlyase subunit 4-like protein; KEGG: rhi:NGR_c10570 NADH dehydrogenase I chain H.
       0.404
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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