STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24078.1PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gem:GM21_3973 NADH ubiquinone oxidoreductase 20 kDa subunit. (288 aa)    
Predicted Functional Partners:
ACV24076.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.999
ACV24077.1
Contains selenocysteine; PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: dal:Dalk_3265 methyl-viologen-reducing hydrogenase delta subunit.
 0.999
ACV24079.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: dps:DP1013 methylviologen-reducing hydrogenase, alpha chain.
 
 0.999
ACV24934.1
TIGRFAM: CoB/CoM heterodisulfide reductase, subunit C; KEGG: dds:Ddes_2098 heterodisulfide reductase, C subunit.
 
 0.997
ACV24080.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: atc:AGR_L_920 ferrodoxin-like protein.
  
 
 0.994
ACV24933.1
KEGG: nis:NIS_0688 succinate dehydrogenase/fumarate reductase, subunit C; TIGRFAM: CoB/CoM heterodisulfide reductase, subunit B; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein.
  
 0.994
ACV24873.1
TIGRFAM: CoB/CoM heterodisulfide reductase, subunit C; KEGG: sat:SYN_01643 Fe-S oxidoreductase.
 
 0.991
ACV24081.1
KEGG: noc:Noc_0025 formylmethanofuran dehydrogenase; Contains selenocysteine; TIGRFAM: formylmethanofuran dehydrogenase subunit B; PFAM: molybdopterin oxidoreductase.
  
 
 0.985
ACV25051.1
Contains selenocysteine; TIGRFAM: coenzyme F420 hydrogenase, subunit alpha; PFAM: nickel-dependent hydrogenase large subunit; KEGG: gem:GM21_3972 nickel-dependent hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.975
ACV24473.1
PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_0822 formate dehydrogenase.
  
 0.969
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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