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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24167.1PFAM: [NiFe]-hydrogenase-3-type complex Eha, EhaM. (137 aa)    
Predicted Functional Partners:
ACV24168.1
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: nam:NAMH_0632 hydrogenase-4 component I.
  
    0.998
ACV24170.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dat:HRM2_02010 Fdx4.
  
    0.994
ACV24171.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dde:Dde_0586 ferredoxin.
  
    0.994
ACV24166.1
PFAM: Protein of unknown function DUF2104, membrane.
  
    0.984
ACV24164.1
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: nam:NAMH_1061 carbon monoxide-induced hydrogenase, CooK subunit.
  
    0.947
ACV24169.1
KEGG: dds:Ddes_1885 NADH dehydrogenase (quinone).
  
    0.914
ACV24160.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaF.
  
    0.879
ACV24163.1
Hypothetical protein.
  
  
 0.864
ACV24162.1
PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaH, predicted; KEGG: vcj:VCD_000092 Na(+) H(+) antiporter subunit D.
  
    0.857
ACV24161.1
PFAM: Protein of unknown function DUF2105, membrane.
  
  
 0.833
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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