Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV24235.1PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ade:Adeh_3266 ATPase AAA-5. (376 aa)    
Predicted Functional Partners:
ACV24236.1
Hypothetical protein.
       0.981
ACV24985.1
SMART: von Willebrand factor type A; KEGG: ade:Adeh_3265 VWA containing CoxE-like.
 
     0.793
ACV24234.1
Transcriptional regulator NikR, CopG family; PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: cff:CFF8240_0934 nickel responsive regulator.
       0.785
htpX
PFAM: peptidase M48 Ste24p; KEGG: dvm:DvMF_0946 peptidase M48 Ste24p; Belongs to the peptidase M48B family.
  
  
 0.523
ACV24674.1
PFAM: GHMP kinase.
   
    0.501
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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