STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24324.1PFAM: glycosyl transferase family 9; KEGG: gur:Gura_0507 glycosyl transferase family protein. (381 aa)    
Predicted Functional Partners:
ACV24323.1
Hypothetical protein; KEGG: cjj:CJJ81176_1143 general glycosylation pathway protein.
       0.727
ACV24352.1
PFAM: PfkB domain protein; KEGG: hypothetical protein LOC100197396.
 
     0.708
ACV24339.1
PFAM: glycosyl transferase family 9; KEGG: sde:Sde_1100 lipopolysaccharide heptosyltransferase-1, putative.
 
     0.665
ACV24353.1
TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: nis:NIS_1448 ADP-heptose synthase.
  
     0.517
ACV24322.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_2230 4Fe-4S ferredoxin iron-sulfur binding domain protein.
       0.481
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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