STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24335.1PFAM: glycosyl transferase family 9; KEGG: gbm:Gbem_0849 lipopolysaccharide heptosyltransferase II. (346 aa)    
Predicted Functional Partners:
ACV24334.1
PFAM: glycosyl transferase family 9; KEGG: pne:Pnec_0548 glycosyl transferase family 9.
 
  
 
0.979
ACV24338.1
PFAM: glycosyl transferase family 9; KEGG: cff:CFF8240_1403 putative heptosyltransferase III WaaQ.
 
  
 
0.921
ACV24332.1
KEGG: MIR domain protein.
       0.779
ACV24333.1
Hypothetical protein.
       0.779
ACV24336.1
TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: wsu:WS0679 glycero-mannoheptose-epimerase.
 
     0.743
ACV24352.1
PFAM: PfkB domain protein; KEGG: hypothetical protein LOC100197396.
 
     0.700
ACV24337.1
PFAM: glycosyl transferase group 1; KEGG: dol:Dole_1804 glycosyl transferase group 1.
       0.695
ACV24339.1
PFAM: glycosyl transferase family 9; KEGG: sde:Sde_1100 lipopolysaccharide heptosyltransferase-1, putative.
 
     0.637
ACV24353.1
TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: nis:NIS_1448 ADP-heptose synthase.
  
     0.539
ACV24331.1
Non-specific serine/threonine protein kinase; KEGG: RIOK2; RIO kinase 2 (yeast); K07179 RIO kinase 2; PFAM: RIO-like kinase; RIO2 kinase, winged helix domain protein; SMART: protein of unknown function RIO1.
       0.523
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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