STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24372.1PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_2388 major facilitator superfamily MFS_1. (384 aa)    
Predicted Functional Partners:
ACV24373.1
S-layer domain protein-like protein; KEGG: bpt:Bpet0291 hypothetical protein.
 
    0.690
ACV24376.1
PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: dal:Dalk_3123 formylmethanofuran dehydrogenase subunit E region.
 
   
 0.658
ACV24375.1
PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: dac:Daci_2400 ArsR family transcriptional regulator; Belongs to the GbsR family.
       0.574
ACV24374.1
Exporter of the RND superfamily protein-like protein; KEGG: mxa:MXAN_0441 hypothetical protein.
       0.572
ACV24377.1
PFAM: 4-oxalocrotonate tautomerase; KEGG: gme:Gmet_1510 4-oxalocrotonate tautomerase.
       0.572
ACV24370.1
PFAM: protein of unknown function DUF87; HerA-ATP synthase, barrel domain; KEGG: pag:PLES_23631 protein of unknown function DUF87.
       0.570
ACV24371.1
PFAM: Protein of unknown function DUF54; KEGG: hypothetical protein; Belongs to the UPF0201 family.
       0.570
ACV24680.1
PFAM: protein of unknown function DUF434; KEGG: sun:SUN_0694 hypothetical protein.
   
    0.419
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.