Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV24434.1PFAM: Protein of unknown function UPF0146; Belongs to the UPF0146 family. (134 aa)    
Predicted Functional Partners:
ACV24435.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dal:Dalk_1102 cobyrinic acid ac-diamide synthase.
       0.773
ACV25335.1
TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase; K00619 amino-acid N-acetyltransferase.
       0.591
ACV24436.1
PFAM: aminotransferase class I and II; KEGG: dal:Dalk_3407 aspartate aminotransferase.
       0.546
ACV25023.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.536
ACV25022.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.525
ACV24244.1
Conserved hypothetical protein.
  
     0.512
ACV24821.1
TIGRFAM: methanogenesis marker protein 17; PFAM: Uncharacterized conserved protein UCP019464, methanogenesis.
  
     0.512
ACV25024.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.500
ACV24036.1
PFAM: Protein of unknown function DUF128; Ribonuclease R winged-helix domain protein; KEGG: sat:SYN_03243 putative cytoplasmic protein.
  
     0.486
rnp2
Ribonuclease P; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
  
     0.482
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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