Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV24544.1Conserved hypothetical protein; KEGG: gur:Gura_4119 putative radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (327 aa)    
Predicted Functional Partners:
pheS
KEGG: similar to predicted protein; K01889 phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase, class IIc-like; tRNA synthetase class II (G H P and S); Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily.
       0.567
ACV24580.1
PFAM: protein of unknown function DUF752; KEGG: tdn:Suden_1933 hypothetical protein.
     0.536
ACV24542.1
Conserved hypothetical protein.
       0.449
ACV24540.1
PFAM: Lactate/malate dehydrogenase; KEGG: ama:AM564 malate dehydrogenase; Belongs to the LDH/MDH superfamily.
 
     0.429
ACV24541.1
PFAM: Protein of unknown function DUF1188.
       0.404
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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