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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24551.1PFAM: peptidase U32; KEGG: dat:HRM2_21100 putative protease. (332 aa)    
Predicted Functional Partners:
ACV24552.1
Hypothetical protein.
       0.906
sepS
O-phosphoseryl-tRNA(Cys) synthetase; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys).
 
    0.727
ACV24550.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: Fahd2a; fumarylacetoacetate hydrolase domain containing 2A.
       0.634
hpt
Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis. Belongs to the purine/pyrimidine phosphoribosyltransferase family. Archaeal HPRT subfamily.
  
    0.534
ACV25292.1
PFAM: nucleoside recognition domain protein; KEGG: dat:HRM2_02300 hypothetical protein.
  
     0.496
ACV24548.1
Hypothetical protein.
       0.461
ACV24069.1
Conserved hypothetical protein.
  
     0.457
ACV24748.1
PFAM: Protein of unknown function DUF166; KEGG: dal:Dalk_4871 protein of unknown function DUF166.
  
     0.422
ACV24822.1
PFAM: Radical SAM domain protein; KEGG: lpf:lpl0804 hypothetical protein.
 
  
 0.421
ACV24434.1
PFAM: Protein of unknown function UPF0146; Belongs to the UPF0146 family.
  
    0.409
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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