Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
ACV24569.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
ACV23866.1
PFAM: UspA domain protein; KEGG: aci:ACIAD1238 hypothetical protein.
   
    0.821
ACV24570.1
KEGG: gur:Gura_2842 AAA family ATPase, CDC48 subfamily protein; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; Vps4 oligomerisation domain protein; ATPase associated with various cellular activities AAA_5; AAA ATPase VAT domain protein; SMART: AAA ATPase.
  
    0.747
ACV25168.1
PFAM: UspA domain protein; KEGG: sat:SYN_01539 universal stress protein.
   
    0.560
ACV23924.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dma:DMR_13800 two-component hybrid sensor and regulator.
   
    0.547
ACV24568.1
PFAM: PP-loop domain protein; KEGG: hypothetical protein.
       0.531
ACV24567.1
PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: hypothetical protein; K07466 replication factor A1.
       0.530
ACV24566.1
TIGRFAM: cell division ATPase MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nam:NAMH_1151 septum site-determining protein MinD.
       0.488
ACV24396.1
Putative signal transduction protein with CBS domains; PFAM: Protein of unknown function DUF293; CBS domain containing protein; Helix-turn-helix type 11 domain protein; SMART: CBS domain containing protein; KEGG: hypothetical protein.
   
    0.433
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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