Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV24611.1TIGRFAM: cell division ATPase MinD; PFAM: Cobyrinic acid ac-diamide synthase; ATPase-like, ParA/MinD; KEGG: lch:Lcho_0698 cobyrinic acid ac-diamide synthase. (271 aa)    
Predicted Functional Partners:
ACV24610.1
Hypothetical protein.
  
    0.996
ACV24609.1
KEGG: hypothetical protein.
  
    0.994
ACV24612.1
PFAM: Uncharacterized conserved protein UCP019262.
       0.948
ACV24608.1
PFAM: glycosyl transferase family 2; KEGG: lip:LIA024 cell wall biosynthesis glycosyltransferase.
  
  
 0.855
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.555
secD
SecD/SecF/SecDF export membrane protein; Involved in protein export.
 
     0.479
ACV24613.1
Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
       0.466
cheD
CheD, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  
 0.458
ACV24011.1
PFAM: Roadblock/LC7 family protein; KEGG: noc:Noc_1488 roadblock/LC7 domain-contain protein.
 
    0.434
ACV24122.1
PFAM: chromosome segregation and condensation protein ScpA; KEGG: hypothetical protein LOC691864.
  
   
 0.419
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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