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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24794.1TIGRFAM: methanogenesis marker 16 metalloprotein; PFAM: protein of unknown function DUF39; KEGG: dvm:DvMF_1464 protein of unknown function DUF39. (380 aa)    
Predicted Functional Partners:
htpX
PFAM: peptidase M48 Ste24p; KEGG: dvm:DvMF_0946 peptidase M48 Ste24p; Belongs to the peptidase M48B family.
       0.872
ACV25328.1
PFAM: ApbE family lipoprotein; KEGG: sfu:Sfum_2124 hypothetical protein; Belongs to the UPF0280 family.
 
   
 0.797
ACV24191.1
PFAM: NIL domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sat:SYN_00800 ferridoxin.
 
  
 0.788
ACV24796.1
TIGRFAM: siroheme synthase; PFAM: TrkA-N domain protein; KEGG: tdn:Suden_1977 siroheme synthase CysG.
       0.537
ACV23857.1
TIGRFAM: methanogenesis marker protein 12; Belongs to the UPF0285 family.
  
     0.454
ACV24979.1
PFAM: Fe-S cluster domain protein; KEGG: geo:Geob_2527 Fe-S cluster domain protein.
 
     0.447
ACV24797.1
PFAM: AIG2 family protein; KEGG: hypothetical protein.
       0.438
tgtA
Archaeosine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
       0.438
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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