STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV24811.1PFAM: Uncharacterized conserved protein UCP019375. (505 aa)    
Predicted Functional Partners:
ACV24809.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dat:HRM2_15240 BioB2.
  
  
 0.992
ACV24810.1
KEGG: Viral A-type inclusion protein repeat containing protein.
       0.942
hmd
Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
  
  
 0.824
ACV25376.1
PFAM: Protein of unknown function DUF2283; KEGG: noc:Noc_1857 hypothetical protein.
       0.706
ACV24812.1
Hypothetical protein.
       0.686
ACV24814.1
Hypothetical protein.
       0.515
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.505
ACV24813.1
Hypothetical protein.
       0.476
ACV24817.1
PFAM: membrane-bound metal-dependent hydrolase; KEGG: pca:Pcar_2844 hypothetical protein.
  
    0.411
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.