STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACV24842.1PFAM: type II secretion system protein E; SMART: Hedgehog/intein hint domain protein; KEGG: aeh:Mlg_2160 type II secretion system protein E. (685 aa)    
Predicted Functional Partners:
ACV24843.1
PFAM: Type II secretion system F domain; KEGG: rle:pRL110574 putative transmembrane pilus component protein.
  
  
 0.957
ACV24844.1
PFAM: Type II secretion system F domain; KEGG: pag:PLES_46811 TadB.
  
  
 0.949
tfb
Transcription factor TFIIB cyclin-related; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
  
    0.757
ACV23931.1
PFAM: Type II secretion system F domain.
 
  
 0.641
ACV24840.1
Hypothetical protein.
  
    0.621
ACV24743.1
PFAM: Protein of unknown function DUF515; KEGG: IMH1; potential GRIP domain protein similar to S. cerevisiae IMH1 (YLR309C); possible Golgi localization and role in protein transport under stress conditions.
     
 0.593
ACV25014.1
PFAM: Type II secretion system F domain.
 
  
 0.563
ACV25016.1
Flagella biogenesis ATPase-like protein; KEGG: bba:Bd2712 DNA repair protein RadA.
 
  
 0.504
ACV23972.1
PFAM: GTP-binding protein HSR1-related; KEGG: similar to CG3983-PB, isoform B.
       0.501
ACV24800.1
PFAM: putative RNA methylase; THUMP domain protein; KEGG: buc:BU363 23S rRNA m(2)G2445 methyltransferase.
       0.501
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.