Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACV25026.1PFAM: Sjogrens syndrome scleroderma autoantigen 1; KEGG: hypothetical protein. (107 aa)    
Predicted Functional Partners:
ACV23956.1
PFAM: Protein of unknown function UPF0147; Belongs to the UPF0147 family.
       0.609
ACV24540.1
PFAM: Lactate/malate dehydrogenase; KEGG: ama:AM564 malate dehydrogenase; Belongs to the LDH/MDH superfamily.
       0.608
ACV25024.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
       0.547
ACV25025.1
Hypothetical protein.
       0.537
ACV23985.1
TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ilo:IL1212 agmatinase; Belongs to the arginase family.
       0.501
ACV23902.1
Hypothetical protein.
       0.477
ACV25023.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
       0.452
ACV24022.1
TIGRFAM: HAD superfamily (subfamily IA) hydrolase, TIGR02253; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fph:Fphi_0258 phosphoglycolate phosphatase.
       0.442
Your Current Organism:
Methanocaldococcus fervens
NCBI taxonomy Id: 573064
Other names: M. fervens AG86, Methanocaldococcus fervens AG86, Methanocaldococcus fervens DSM 4213, Methanocaldococcus fervens str. AG86, Methanocaldococcus fervens strain AG86
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