STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU11714.1Transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: ccs:CCNA_00131 Rrf2 family protein. (139 aa)    
Predicted Functional Partners:
ADU11715.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_4770 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.774
ADU14399.1
Cysteine desulfurase; KEGG: cak:Caul_2587 aminotransferase class V; PFAM: aminotransferase class V.
  
  
 0.661
kup
Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
       0.518
ADU14128.1
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_B2369 putative phthalate 4,5-dioxygenase reductase subunit (OhpA1).
  
  
 0.494
ADU13427.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: pzu:PHZ_c0421 NifU-like protein involved in Fe-S cluster formation.
  
  
 0.446
ADU11712.1
Protein of unknown function DUF2199; KEGG: bcg:BCG9842_B0295 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2199.
       0.424
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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