STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU11785.1KEGG: pzu:PHZ_c0200 helicase, UvrD/Rep family; TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1168 aa)    
Predicted Functional Partners:
ADU11784.1
TIGRFAM: double-strand break repair protein AddB; KEGG: cak:Caul_4852 double-strand break repair protein AddB.
   
 0.975
ADU13138.1
KEGG: mea:Mex_p10045 conjugal transfer protein TraA; TIGRFAM: Ti-type conjugative transfer relaxase TraA; PFAM: MobA/MobL protein.
  
 
 0.840
ADU13947.1
Hypothetical protein; KEGG: bav:BAV0378 nickase.
  
 
 0.840
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
   
 0.833
ADU11781.1
PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: cak:Caul_4849 hypothetical protein.
     
 0.819
ADU11782.1
PFAM: aminoglycoside phosphotransferase; KEGG: cak:Caul_4850 aminoglycoside phosphotransferase.
       0.810
ADU11783.1
PFAM: Nucleotidyl transferase; KEGG: cak:Caul_4851 nucleotidyl transferase.
       0.810
ADU11780.1
KEGG: pzu:PHZ_c0205 acyltransferase family protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
       0.777
ADU13413.1
PFAM: Stringent starvation protein B; KEGG: hypothetical protein.
  
     0.746
ADU12009.1
PFAM: Protein of unknown function DUF2312; KEGG: pzu:PHZ_c3117 hypothetical protein.
  
     0.720
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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