STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU11804.1KEGG: pzu:PHZ_c0045 hypothetical protein. (180 aa)    
Predicted Functional Partners:
ADU13738.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rce:RC1_3723 TonB-dependent receptor, putative.
  
     0.576
ADU15118.1
KEGG: ccs:CCNA_00970 long-chain-fatty-acid--CoA ligase.
  
     0.573
ADU15061.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c2096 TonB-dependent receptor.
  
     0.572
ADU13232.1
KEGG: pzu:PHZ_c2894 hypothetical protein.
  
     0.564
ADU11932.1
KEGG: response regulator receiver protein; PFAM: LytTr DNA-binding region; SMART: LytTr DNA-binding region.
  
     0.563
ADU12906.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rce:RC1_3723 TonB-dependent receptor, putative.
  
     0.560
ADU13072.1
PFAM: Phosphoglycerate mutase; KEGG: cak:Caul_3318 phosphoglycerate mutase.
  
     0.523
ADU11805.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cja:CJA_3744 transcriptional regulator.
       0.503
ADU14999.1
PFAM: TonB-dependent receptor plug; KEGG: hne:HNE_1863 TonB-dependent receptor.
  
     0.485
ADU15097.1
PFAM: Protein of unknown function DUF3035; KEGG: pzu:PHZ_c3163 hypothetical protein.
  
     0.480
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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