STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU11896.1TIGRFAM: penicillin-binding protein 1C; KEGG: ccs:CCNA_03685 multimodular transpeptidase-transglycosylase; PFAM: glycosyl transferase family 51; Penicillin-binding domain protein; penicillin-binding protein transpeptidase. (696 aa)    
Predicted Functional Partners:
ADU14630.1
TIGRFAM: penicillin-binding protein, 1A family; KEGG: 1A family penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
  
  
0.930
ADU14031.1
TIGRFAM: penicillin-binding protein, 1A family; KEGG: 1A family penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
  
  
0.927
ADU11895.1
PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; Alpha-2-macroglobulin MG1 domain; KEGG: cak:Caul_0067 alpha-2-macroglobulin domain-containing protein.
   
 0.921
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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