STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU11916.1KEGG: gtn:GTNG_2029 hypothetical protein. (220 aa)    
Predicted Functional Partners:
ADU11917.1
Regulatory protein ArsR; KEGG: mmr:Mmar10_0065 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
    0.956
ADU12370.1
KEGG: pla:Plav_2671 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
    0.803
ADU11925.1
KEGG: oca:OCAR_5411 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
 
    0.585
ADU11915.1
PAS/PAC sensor signal transduction histidine kinase; KEGG: pzu:PHZ_c0218 tyrosine kinase DivL; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
       0.554
ADU11918.1
KEGG: pzu:PHZ_c0219 hypothetical protein.
       0.529
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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