STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU11977.1PFAM: protein of unknown function UPF0074; KEGG: oan:Oant_3584 BadM/Rrf2 family transcriptional regulator. (163 aa)    
Predicted Functional Partners:
ADU11978.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4049 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.928
ADU14399.1
Cysteine desulfurase; KEGG: cak:Caul_2587 aminotransferase class V; PFAM: aminotransferase class V.
  
  
 0.661
ADU11976.1
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pzu:PHZ_c3319 ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
       0.570
ADU14128.1
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bxe:Bxe_B2369 putative phthalate 4,5-dioxygenase reductase subunit (OhpA1).
  
  
 0.494
ADU11979.1
PFAM: deoxyhypusine synthase; KEGG: cak:Caul_0257 deoxyhypusine synthase-like protein; Belongs to the deoxyhypusine synthase family.
       0.465
ADU13427.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: pzu:PHZ_c0421 NifU-like protein involved in Fe-S cluster formation.
  
  
 0.446
ADU12684.1
PFAM: major facilitator superfamily MFS_1; KEGG: ctt:CtCNB1_2269 major facilitator superfamily MFS_1.
 
     0.433
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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