STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12016.1Hypothetical protein; KEGG: mag:amb2001 type V secretory pathway, adhesin AidA. (196 aa)    
Predicted Functional Partners:
ADU12015.1
Hypothetical protein; KEGG: sfu:Sfum_1228 translation initiation factor IF-2.
      
0.773
ADU12017.1
Hypothetical protein; KEGG: hvo:HVO_0176 cationic amino acid transporter.
       0.773
ADU12018.1
PFAM: GcrA cell cycle regulator; KEGG: jan:Jann_1020 GcrA cell cycle regulator.
       0.773
ADU12019.1
Hypothetical protein; KEGG: cpv:cgd5_3420 TRAP-C2 extracellular protein.
       0.773
ADU12020.1
KEGG: mno:Mnod_6985 hypothetical protein.
       0.701
ADU12021.1
KEGG: xau:Xaut_0770 hypothetical protein.
       0.701
ADU12022.1
TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: tmz:Tmz1t_2797 P4 family phage/plasmid primase; SMART: primase P4.
       0.701
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.