STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12022.1TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: tmz:Tmz1t_2797 P4 family phage/plasmid primase; SMART: primase P4. (521 aa)    
Predicted Functional Partners:
ADU12021.1
KEGG: xau:Xaut_0770 hypothetical protein.
 
   
 0.833
ADU12020.1
KEGG: mno:Mnod_6985 hypothetical protein.
 
     0.816
ADU12015.1
Hypothetical protein; KEGG: sfu:Sfum_1228 translation initiation factor IF-2.
       0.701
ADU12016.1
Hypothetical protein; KEGG: mag:amb2001 type V secretory pathway, adhesin AidA.
       0.701
ADU12017.1
Hypothetical protein; KEGG: hvo:HVO_0176 cationic amino acid transporter.
       0.701
ADU12018.1
PFAM: GcrA cell cycle regulator; KEGG: jan:Jann_1020 GcrA cell cycle regulator.
       0.701
ADU12019.1
Hypothetical protein; KEGG: cpv:cgd5_3420 TRAP-C2 extracellular protein.
       0.701
ADU12027.1
Phage portal protein, HK97 family; KEGG: bmj:BMULJ_04637 bacteriophage portal protein; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
 
     0.575
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
    
 0.470
ADU12023.1
PFAM: NGN domain-containing protein; KEGG: mag:amb0048 transcription antitermination protein NusG.
       0.409
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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