STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12041.1KEGG: aba:Acid345_3158 hypothetical protein. (200 aa)    
Predicted Functional Partners:
ADU12043.1
KEGG: rcu:RCOM_2096010 hypothetical protein.
  
    0.885
ADU12040.1
KEGG: pha:PSHAa1553 hypothetical protein.
       0.794
ADU12042.1
KEGG: ppg:PputGB1_3393 hypothetical protein.
       0.794
ADU12039.1
TIGRFAM: phage tape measure protein; KEGG: avi:Avi_1990 tail component of prophage protein.
       0.774
ADU12044.1
KEGG: cak:Caul_3500 hypothetical protein.
       0.762
ADU12038.1
KEGG: mno:Mnod_6569 hypothetical protein.
       0.757
ADU12045.1
Hypothetical protein; KEGG: pis:Pisl_0431 oligosaccharyl transferase, STT3 subunit.
       0.751
ADU12036.1
PFAM: major tail protein TP901-1; KEGG: avi:Avi_1979 hypothetical protein.
       0.687
ADU12037.1
PFAM: Protein of unknown function DUF3356; KEGG: smd:Smed_1323 hypothetical protein.
       0.671
ADU13239.1
PFAM: Peptidase M15A; KEGG: cyt:cce_3923 hypothetical protein.
  
    0.611
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.