STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12088.1KEGG: hypothetical protein. (277 aa)    
Predicted Functional Partners:
ADU12087.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_2544 acetyltransferase.
       0.773
ADU13643.1
KEGG: ccs:CCNA_01284 endo-1,4-beta-xylanase.
  
     0.772
ADU14903.1
KEGG: hypothetical protein.
  
     0.757
ADU12089.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cak:Caul_3615 hypothetical protein.
       0.533
ADU12992.1
Pectate lyase; KEGG: sal:Sala_3040 pectate lyase.
  
     0.477
ADU13395.1
PFAM: protein of unknown function DUF1593; KEGG: rba:RB3513 signal peptide.
  
     0.473
ADU13815.1
PFAM: glycosyl hydrolase family 88; KEGG: family 88 glycosyl hydrolase.
 
     0.467
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.