STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12102.1KEGG: bac:BamMC406_0422 hypothetical protein. (90 aa)    
Predicted Functional Partners:
ADU12103.1
PFAM: protein of unknown function DUF188; KEGG: pzu:PHZ_c1189 hypothetical protein; Belongs to the UPF0178 family.
       0.773
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.718
ADU12100.1
KEGG: pzu:PHZ_c0269 hypothetical protein.
       0.622
ADU12104.1
KEGG: pzu:PHZ_c0316 zinc-dependent metallopeptidase; PFAM: peptidase M2 peptidyl-dipeptidase A.
       0.523
ADU12099.1
Cobalamin synthesis protein P47K; KEGG: ccs:CCNA_00323 low-affinity zinc transport protein; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SMART: cobalamin synthesis CobW domain protein.
       0.415
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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