STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12118.1PFAM: type II and III secretion system protein; transport-associated; KEGG: cak:Caul_4193 type II and III secretion system protein; Belongs to the bacterial secretin family. (476 aa)    
Predicted Functional Partners:
ADU12119.1
TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: cak:Caul_4194 Flp pilus assembly protein CpaB; SMART: SAF domain protein.
 
  
 0.985
ADU12116.1
Response regulator receiver protein; KEGG: ccs:CCNA_03038 pilus assembly ATPase CpaE.
 
  
 0.980
ADU12115.1
PFAM: type II secretion system protein E; KEGG: cak:Caul_4190 type II secretion system protein E.
  
 0.971
ADU12114.1
PFAM: Type II secretion system F domain; KEGG: ccs:CCNA_03036 TadB-related pilus assembly protein.
 
  
 0.964
ADU12113.1
PFAM: Type II secretion system F domain; KEGG: cak:Caul_4188 type II secretion system protein.
 
  
 0.945
ADU12120.1
PFAM: peptidase A24A prepilin type IV; KEGG: pzu:PHZ_c0357 prepilin peptidase CpaA.
 
  
 0.897
ADU12117.1
KEGG: ccs:CCNA_03039 pilus assembly protein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD-related.
 
   
 0.895
ADU12122.1
PFAM: Flp/Fap pilin component; KEGG: ara:Arad_0359 component of type IV pilus.
 
  
 0.826
ADU12130.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cak:Caul_4586 TPR repeat-containing protein.
 
  
 0.805
ADU13785.1
Von Willebrand factor type A; KEGG: bbt:BBta_4775 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
 
  
 0.799
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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