STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12147.1KEGG: cak:Caul_1754 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein. (495 aa)    
Predicted Functional Partners:
ADU13567.1
KEGG: cak:Caul_1545 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein.
  
  
 
0.922
ADU12148.1
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mannitol dehydrogenase domain-containing protein.
 
 0.915
ADU14972.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sjp:SJA_C2-03440 starvation sensing protein RspA.
  
 
 0.908
ADU13790.1
2-deoxy-D-gluconate 3-dehydrogenase; KEGG: xcv:XCV0153 short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.
     
  0.900
ADU15002.1
2-deoxy-D-gluconate 3-dehydrogenase; KEGG: xcv:XCV0153 short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.
     
  0.900
ADU13774.1
PFAM: PfkB domain protein; KEGG: xcv:XCV0122 2-keto-3-deoxygluconate kinase.
 
  
 0.868
ADU11721.1
TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: cak:Caul_4780 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
uxaC
KEGG: pzu:PHZ_c2452 glucuronate isomerase; PFAM: Glucuronate isomerase.
  
 0.770
ADU13778.1
PFAM: glycoside hydrolase family 28; KEGG: tit:Thit_1735 glycoside hydrolase family 28; Belongs to the glycosyl hydrolase 28 family.
 
     0.426
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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