STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12148.1PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: mannitol dehydrogenase domain-containing protein. (479 aa)    
Predicted Functional Partners:
uxaC
KEGG: pzu:PHZ_c2452 glucuronate isomerase; PFAM: Glucuronate isomerase.
 
 
 0.990
ADU14972.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sjp:SJA_C2-03440 starvation sensing protein RspA.
 
  
 0.970
ADU12147.1
KEGG: cak:Caul_1754 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein.
 
 0.915
ADU12754.1
KEGG: 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase.
  
     0.482
ADU13567.1
KEGG: cak:Caul_1545 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein.
  
 0.462
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.462
ADU11817.1
PTS IIA-like nitrogen-regulatory protein PtsN; KEGG: pzu:PHZ_c0181 PTS system, nitrogen regulatory IIA component PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
  
  
 0.429
pgi
KEGG: ccs:CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family.
     
 0.408
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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