STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12231.1PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: nar:Saro_1548 TonB-dependent receptor. (751 aa)    
Predicted Functional Partners:
ADU12232.1
KEGG: hba:Hbal_2496 transcriptional regulator, RpiR family; manually curated; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS).
 
     0.810
ADU12731.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nar:Saro_1629 TonB-dependent receptor.
  
    0.758
ADU13330.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2735 TonB-dependent receptor.
  
     0.635
ADU12230.1
KEGG: hba:Hbal_2493 alkaline phosphatase.
 
     0.555
ADU13541.1
KEGG: hba:Hbal_0471 outer membrane protein domain-containing protein.
  
     0.524
ADU12557.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_4698 TonB-dependent receptor.
  
     0.514
ADU14041.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00210 TonB-dependent receptor.
  
   
 0.513
ADU13126.1
KEGG: nar:Saro_2624 hypothetical protein.
  
     0.492
ADU12229.1
TIGRFAM: phospholipase C, phosphocholine-specific; KEGG: nar:Saro_1552 twin-arginine translocation pathway signal; PFAM: phosphoesterase; protein of unknown function DUF756.
       0.483
ADU13270.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nar:Saro_1708 TonB-dependent receptor.
  
    0.449
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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