STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12473.1YceI family protein; KEGG: rru:Rru_A3681 YceI; PFAM: YceI family protein; SMART: YceI family protein; Belongs to the UPF0312 family. (193 aa)    
Predicted Functional Partners:
ADU12472.1
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mms:mma_1661 hypothetical protein.
       0.595
ADU14679.1
YceI family protein; KEGG: cytochrome b561; PFAM: YceI family protein; Cytochrome b/b6 domain; SMART: YceI family protein; Belongs to the UPF0312 family.
 
  
0.441
ADU12474.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0346 TonB-dependent receptor.
  
    0.431
ADU12471.1
PFAM: Glutathione S-transferase domain; KEGG: ddc:Dd586_2446 glutathione S-transferase domain protein.
  
    0.411
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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