STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12487.1PFAM: Bile acid:sodium symporter; KEGG: sjp:SJA_C1-27070 putative sodium/bile acid symporter. (328 aa)    
Predicted Functional Partners:
ADU12486.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.668
ADU12904.1
PFAM: Malate/L-lactate dehydrogenase; KEGG: rme:Rmet_5095 malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
   
    0.663
ADU12488.1
Putative signal transduction protein with CBS domains; KEGG: rce:RC1_3454 CBS domain protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.
       0.523
ADU12489.1
Hypothetical protein; KEGG: aba:Acid345_1821 aspartate carbamoyltransferase.
       0.523
ADU12485.1
KEGG: lbl:LBL_0709 hypothetical protein.
       0.482
ADU12484.1
KEGG: bxe:Bxe_A1314 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase.
       0.406
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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