STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12553.1KEGG: dsh:Dshi_1017 TonB-dependent heme/hemoglobin receptor family protein; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug. (696 aa)    
Predicted Functional Partners:
ADU12554.1
KEGG: rce:RC1_3835 protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain.
 
 
 0.888
ADU13330.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2735 TonB-dependent receptor.
  
     0.679
ADU14048.1
KEGG: azl:AZL_d01940 TonB protein; TIGRFAM: TonB family protein; PFAM: TonB domain.
 
 
 0.561
ADU12552.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: nickel transport complex NikM.
  
    0.526
ADU14612.1
PFAM: transport system permease protein; KEGG: ccs:CCNA_01250 transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.502
ADU12551.1
KEGG: cak:Caul_1114 hypothetical protein.
     
 0.485
ADU14047.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: rce:RC1_1932 TonB-dependent receptor, putative.
  
    0.475
ADU12975.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: hba:Hbal_2484 TonB-dependent receptor.
  
  
 0.472
ADU12039.1
TIGRFAM: phage tape measure protein; KEGG: avi:Avi_1990 tail component of prophage protein.
  
     0.471
ADU12962.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.416
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.