STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12571.1PFAM: Carotenoid oxygenase; KEGG: ccs:CCNA_00336 lignostilbene-alpha,beta-dioxygenase. (495 aa)    
Predicted Functional Partners:
ADU12572.1
PFAM: Protein of unknown function DUF2141; KEGG: mmr:Mmar10_2825 hypothetical protein.
 
   
 0.880
ADU13537.1
Methyltransferase; KEGG: pzu:PHZ_c1906 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260; protein of unknown function DUF323.
  
   
 0.543
ADU14650.1
PFAM: pentapeptide repeat protein; KEGG: ccs:CCNA_01967 hypothetical protein.
  
     0.522
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.471
ADU13703.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pfl:PFL_6138 Rieske (2Fe-2S) domain-containing protein.
  
   
 0.459
ADU12187.1
Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: pzu:PHZ_c3140 putative phenylpropionate dioxygenase.
  
   
 0.451
ADU13805.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: slo:Shew_1330 Rieske (2Fe-2S) domain-containing protein.
  
   
 0.424
ADU12600.1
PFAM: pentapeptide repeat protein; KEGG: ccs:CCNA_02343 hypothetical protein.
  
     0.414
ispDF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
      
 0.414
ADU12585.1
PFAM: pentapeptide repeat protein; KEGG: cak:Caul_0246 pentapeptide repeat-containing protein.
  
     0.411
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.