STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12603.1TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ccs:CCNA_00799 ABC transporter, ATP-binding protein CydD; SMART: AAA ATPase. (573 aa)    
Predicted Functional Partners:
ADU12602.1
KEGG: cysteine ABC transporter permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
0.999
ADU12605.1
KEGG: swi:Swit_3735 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
 
  
 0.987
ADU12604.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: cak:Caul_0634 cytochrome bd ubiquinol oxidase subunit I.
  
 0.983
ADU14083.1
KEGG: bpd:BURPS668_1900 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
   
0.723
ADU12601.1
PFAM: peptidase T2 asparaginase 2; KEGG: ccs:CCNA_00096 L-asparaginase.
       0.580
ADU12606.1
KEGG: cak:Caul_0636 cyd operon protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein.
  
  
 0.488
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.