STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12670.1Beta-lactamase; KEGG: glo:Glov_2580 beta-lactamase; PFAM: beta-lactamase. (310 aa)    
Predicted Functional Partners:
ADU12669.1
KEGG: ccs:CCNA_02065 acylamino-acid-releasing enzyme.
       0.773
glsA
TIGRFAM: Glutaminase, core; KEGG: glutaminase; PFAM: Glutaminase, core; Belongs to the glutaminase family.
       0.639
ADU12668.1
KEGG: cak:Caul_3422 hypothetical protein.
       0.508
ADU12667.1
KEGG: ccs:CCNA_02562 Sel1 repeat domain protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein.
       0.495
ADU12672.1
KEGG: ava:Ava_B0335 transcription regulator.
       0.439
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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