STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12692.1PFAM: peptidase M50; KEGG: ccs:CCNA_03492 transporter. (252 aa)    
Predicted Functional Partners:
ADU12691.1
PFAM: Protein of unknown function DUF3313; KEGG: pzu:PHZ_c1694 hypothetical protein.
       0.541
ADU11982.1
PFAM: regulatory protein TetR; KEGG: cak:Caul_0268 TetR family transcriptional regulator.
  
     0.529
ADU14689.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: pzu:PHZ_c1296 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain-containing protein; Belongs to the peptidase S11 family.
 
    0.421
ADU14349.1
Hypothetical protein; KEGG: htu:Htur_1515 Zn-dependent hydrolase of the beta-lactamase fold-like protein.
  
     0.415
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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