STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12763.1Cobalt chelatase, pCobT subunit; SMART: von Willebrand factor type A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: ccs:CCNA_00708 cobaltochelatase CobT subunit; PFAM: Cobalt chelatase CobT subunit. (621 aa)    
Predicted Functional Partners:
ADU12762.1
TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: ccs:CCNA_03115 cobaltochelatase CobS subunit; PFAM: ATPase associated with various cellular activities AAA_5.
 
 
 0.990
ADU12190.1
TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: ret:RHE_CH03790 hypothetical protein; PFAM: cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.900
ADU12760.1
KEGG: cak:Caul_0714 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.
 
     0.803
atpF-2
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.714
ADU12764.1
KEGG: hypothetical protein.
       0.691
atpF
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.691
ADU11784.1
TIGRFAM: double-strand break repair protein AddB; KEGG: cak:Caul_4852 double-strand break repair protein AddB.
  
     0.656
ADU12765.1
KEGG: bbt:BBta_0018 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
       0.631
ADU12771.1
Manually curated; PFAM: helicase domain protein; KEGG: pzu:PHZ_c0710 superfamily II DNA and RNA helicase; SMART: helicase domain protein.
  
     0.598
ADU12866.1
PFAM: Uncharacterised conserved protein UCP032146; KEGG: pzu:PHZ_c2197 hypothetical protein.
  
     0.594
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.